{"id":8742,"date":"2020-09-11T20:17:41","date_gmt":"2020-09-11T18:17:41","guid":{"rendered":"https:\/\/h3africa.org\/?page_id=8742"},"modified":"2021-08-17T21:56:34","modified_gmt":"2021-08-17T19:56:34","slug":"eanbit","status":"publish","type":"page","link":"https:\/\/h3africa.org\/index.php\/eanbit\/","title":{"rendered":"Eastern Africa Network for Bioinformatics Training (EANBIT)"},"content":{"rendered":"[vc_row css_animation=&#8221;fadeInDown&#8221;][vc_column][vc_column_text css_animation=&#8221;none&#8221; css=&#8221;.vc_custom_1590657817569{margin-top: 36px !important;}&#8221;]\n<h6><a style=\"text-decoration: none;\" href=\"https:\/\/h3africa.org\/index.php\/consortium\/projects-2-2\/#1558353579025-3067d7fc-8034\"><em>H3Africa Bioinformatics Training Program<\/em><\/a><\/h6>\n<h1>Eastern Africa Network of Bioinformatics Training (EANBiT)<\/h1>\n<h4>The Goal: to strengthen bioinformatics applications in biosciences research through high quality individual training, research mentorship and enhancing institutional capacity in eastern Africa.<\/h4>\n<div class=\"wp-block-buttons aligncenter\">\n\n<!-- \/wp:post-content -->\n\n<\/div>\n<!-- \/wp:buttons -->\n\n[\/vc_column_text][vc_column_text]\n<h3>Project Leads<\/h3>\n[\/vc_column_text][vc_row_inner][vc_column_inner width=&#8221;1\/2&#8243;]<div class=\"team team_vertical\"><div class=\"image_frame photo no_link scale-with-grid\"><div class=\"image_wrapper\"><img loading=\"lazy\" decoding=\"async\" class=\"scale-with-grid\" src=\"https:\/\/h3africa.org\/wp-content\/uploads\/2020\/09\/masiga.png\" alt=\"masiga\" width=\"105\" height=\"107\"\/><\/div><\/div><div class=\"desc_wrapper\"><h4>Dr. Daniel Masiga<\/h4><p class=\"subtitle\">International Centre of Insect Physiology and Ecology (ICIPE) <\/p><hr class=\"hr_color\" \/><div class=\"desc\"><\/div><div class=\"links\"><a href=\"mailto:dmasiga@icipe.org\" class=\"icon_bar icon_bar_small\"><span class=\"t\"><i class=\"icon-mail\"><\/i><\/span><span class=\"b\"><i class=\"icon-mail\"><\/i><\/span><\/a><\/div><\/div><\/div>\n[\/vc_column_inner][vc_column_inner width=&#8221;1\/2&#8243;]<div class=\"team team_vertical\"><div class=\"image_frame photo no_link scale-with-grid\"><div class=\"image_wrapper\"><img loading=\"lazy\" decoding=\"async\" class=\"scale-with-grid\" src=\"https:\/\/h3africa.org\/wp-content\/uploads\/2020\/09\/masiga2.png\" alt=\"masiga2\" width=\"101\" height=\"107\"\/><\/div><\/div><div class=\"desc_wrapper\"><h4>Karen Wambui<\/h4><p class=\"subtitle\">International Centre of Insect Physiology and Ecology (ICIPE) <\/p><hr class=\"hr_color\" \/><div class=\"desc\"><\/div><div class=\"links\"><a href=\"mailto:kwambui@icipe.org\" class=\"icon_bar icon_bar_small\"><span class=\"t\"><i class=\"icon-mail\"><\/i><\/span><span class=\"b\"><i class=\"icon-mail\"><\/i><\/span><\/a><\/div><\/div><\/div>\n[\/vc_column_inner][\/vc_row_inner][vc_column_text]<h3>The Problem<\/h3>\n<p>Researchers working in the life sciences are generating data of increasing size and complexity due to modern high throughput genome sequencing and molecular techniques. Interpreting this\/such data is essential to understand health and diseases and to develop solutions to improve African and global health. Unfortunately, few universities in eastern Africa offer advanced degrees (Master\u2019s or PhD) in Bioinformatics training and those that do often lack sufficient teaching faculty, infrastructure and\/or active, relevant and stimulating research environments where the students can be exposed to high quality data and emerging bioinformatics applications and developments. Considering this and also the inadequate modern research infrastructure in Africa, there is an ever-increasing need to develop the human and physical capacity for bioinformatics research in Africa to enable the interpretation of valuable African genomics data.<\/p>\n<h3>Project Strategy<\/h3>\n<ol>\n<li>Establish a collaborative network of three universities and four research institutes in eastern Africa to deliver an excellent harmonized MSc program in Bioinformatics training and research mentorship.<\/li>\n<li>Generate a cohort of at least 48 highly trained bioinformatics master\u2019s graduates who can engage in international collaborations and lead analysis of data generated by H3Africa and other high-profile projects.<\/li>\n<\/ol>\n<h3>Potential Impact<\/h3>\n<p>The increasing number of highly qualified bioinformaticians trained through EANBiT will have the knowledge and skills to analyze genomics, genetic and environmental data relevant to cross cutting health issues in eastern Africa. They will be competent to engage in equitable collaborations as highly qualified Bioinformaticians with peers in Africa and elsewhere, to lead research, participate in the analysis of complex datasets and train the next generation of bioinformaticians. As genomic data grows in influence on health research and practice, growing the generation of young Africa scholars with this competence is essential.<\/p>\n<p>Program highlights include:<\/p>\n<ul>\n<li>Harmonized MSc. in Bioinformatics curricula that have been developed and established at Pwani University in Kenya and Makerere University in Uganda<\/li>\n<li>32 MSc. in Bioinformatics fellowships have been awarded in 03 different cohorts from 2019 to date.<\/li>\n<li>Eight (8) out of nine (9) of the Cohort 01 fellows graduated in June 2021. The ninth has successfully defended their thesis and is finalizing corrections for final submission.<\/li>\n<li>Cohort 01 fellows are currently transitioning to PhD (2), and employment (3).<\/li>\n<li>One cohort 02 fellow has been awarded a PhD fellowship starting September 2021. The cohort fellows are currently finalizing their MSc. projects.<\/li>\n<li>Three (3) bioinformatics residential trainings have been conducted (01 Virtually) with 90 participants in total.<\/li>\n<\/ul>\n<p><!-- wp:heading {\"level\":3} --><\/p>\n<h3>Project Sites<\/h3>\n<p><!-- \/wp:heading --><\/p>\n<p><!-- wp:media-text {\"mediaId\":7441,\"mediaType\":\"image\",\"mediaWidth\":28} --><\/p>\n<div class=\"wp-block-media-text alignwide is-stacked-on-mobile\" style=\"grid-template-columns: 28% auto;\">\n<figure class=\"wp-block-media-text__media\"><a href=\"https:\/\/h3africa.org\/?attachment_id=8744\"><img loading=\"lazy\" decoding=\"async\" class=\"alignright wp-image-8744 size-medium\" src=\"https:\/\/h3africa.org\/wp-content\/uploads\/2020\/09\/Asset-29-281x300.png\" alt=\"\" width=\"281\" height=\"300\" srcset=\"https:\/\/h3africa.org\/wp-content\/uploads\/2020\/09\/Asset-29-281x300.png 281w, https:\/\/h3africa.org\/wp-content\/uploads\/2020\/09\/Asset-29-958x1024.png 958w, https:\/\/h3africa.org\/wp-content\/uploads\/2020\/09\/Asset-29-768x821.png 768w, https:\/\/h3africa.org\/wp-content\/uploads\/2020\/09\/Asset-29-1437x1536.png 1437w, https:\/\/h3africa.org\/wp-content\/uploads\/2020\/09\/Asset-29-1916x2048.png 1916w, https:\/\/h3africa.org\/wp-content\/uploads\/2020\/09\/Asset-29-137x146.png 137w, https:\/\/h3africa.org\/wp-content\/uploads\/2020\/09\/Asset-29-47x50.png 47w, https:\/\/h3africa.org\/wp-content\/uploads\/2020\/09\/Asset-29-70x75.png 70w\" sizes=\"auto, (max-width: 281px) 100vw, 281px\" \/><\/a><\/figure>\n<div class=\"wp-block-media-text__content\">\n<p><!-- wp:paragraph --><\/p>\n<p><strong>A: Kenya<\/strong><br \/>International Centre of Insect Physiology and Ecology (ICIPE), the KEMRI Wellcome Trust Research Programme, Pwani University, Biosciences eastern and central Africa-International Livestock Research Institute (BecA-ILRI hub)<\/p>\n<p><strong>B: Uganda<\/strong><br \/>Makerere University, Uganda Virus Research Institute<\/p>\n<p><strong>C: Tanzania<\/strong><br \/>Muhimbili University of Health and Allied Sciences<\/p>\n<\/div>\n<\/div>\n<p><!-- \/wp:paragraph --><\/p>\n<p><!-- wp:buttons {\"align\":\"center\"} --><\/p>\n<div class=\"wp-block-buttons aligncenter\">\n<p><!-- wp:button {\"backgroundColor\":\"vivid-red\",\"textColor\":\"very-light-gray\",\"borderRadius\":10,\"className\":\"is-style-outline\"} --><\/p>\n<h3 style=\"text-align: left;\">Funding<\/h3>\n<div style=\"text-align: left;\">This work is supported by the U.S. National Institutes of Health (NIH), Office of the Director (OD), the Fogarty International Center (FIC), and the National Human Genome Research Institute (NHGRI) grant number U2RTW010677.<\/div>\n<\/div>[\/vc_column_text][vc_column_text]\n<h3>Additional Resources<\/h3>\n[\/vc_column_text][vc_row_inner][vc_column_inner width=&#8221;1\/3&#8243;][vc_btn title=&#8221;Project Publications (PubMed)&#8221; style=&#8221;custom&#8221; custom_background=&#8221;#c12000&#8243; custom_text=&#8221;#ffffff&#8221; shape=&#8221;round&#8221; align=&#8221;center&#8221; link=&#8221;url:https%3A%2F%2Fpubmed.ncbi.nlm.nih.gov%2F%3Fterm%3DTW010677%255BGrant%2BNumber%255D|title:Masgia%20PubMed%20Search|target:%20_blank|&#8221;][\/vc_column_inner][vc_column_inner width=&#8221;1\/3&#8243;][vc_btn title=&#8221;Scientific Description and Aims (NIH RePORT)&#8221; style=&#8221;custom&#8221; custom_background=&#8221;#c12000&#8243; custom_text=&#8221;#ffffff&#8221; shape=&#8221;round&#8221; align=&#8221;center&#8221; link=&#8221;url:https%3A%2F%2Fprojectreporter.nih.gov%2Fproject_info_description.cfm%3Faid%3D10005508%26icde%3D51644061%26ddparam%3D%26ddvalue%3D%26ddsub%3D%26cr%3D1%26csb%3Ddefault%26cs%3DASC%26pball%3D|title:Masiga%20NIH%20RePORT|target:%20_blank|&#8221;][\/vc_column_inner][vc_column_inner width=&#8221;1\/3&#8243;][vc_btn title=&#8221;Download a PDF of this page&#8221; style=&#8221;custom&#8221; custom_background=&#8221;#c12000&#8243; custom_text=&#8221;#ffffff&#8221; shape=&#8221;round&#8221; align=&#8221;center&#8221; link=&#8221;url:https%3A%2F%2Fh3africa.org%2Fwp-content%2Fuploads%2F2021%2F08%2FMasiga_H3ACommDoc_updated.pdf|title:Masiga%20Comm%20Doc|target:%20_blank|&#8221;][\/vc_column_inner][\/vc_row_inner][vc_column_text]\n<p style=\"text-align: center;\"><em><a style=\"text-decoration: none;\" href=\"https:\/\/h3africa.org\/index.php\/consortium\/projects-2\/\">Return to H3A Projects Page<\/a><\/em><\/p>\n[\/vc_column_text][\/vc_column][\/vc_row]","protected":false},"excerpt":{"rendered":"<p>Eastern Africa Network for Bioinformatics Training \u2013 (EANBiT) PROGRAM SUMMARY Developing sufficient mass of research leaders requires a large starting pool of high quality trainees at the early stage of the training pipeline and support to enhance their progression up the pipeline. As such Masters training,<\/p>\n","protected":false},"author":16,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_coblocks_attr":"","_coblocks_dimensions":"","_coblocks_responsive_height":"","_coblocks_accordion_ie_support":"","footnotes":""},"categories":[7,4],"tags":[85],"class_list":["post-8742","page","type-page","status-publish","hentry","category-consortium-documents","category-projects","tag-global-health-bioinformatics-research-training-program-3"],"_links":{"self":[{"href":"https:\/\/h3africa.org\/index.php\/wp-json\/wp\/v2\/pages\/8742","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/h3africa.org\/index.php\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/h3africa.org\/index.php\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/h3africa.org\/index.php\/wp-json\/wp\/v2\/users\/16"}],"replies":[{"embeddable":true,"href":"https:\/\/h3africa.org\/index.php\/wp-json\/wp\/v2\/comments?post=8742"}],"version-history":[{"count":7,"href":"https:\/\/h3africa.org\/index.php\/wp-json\/wp\/v2\/pages\/8742\/revisions"}],"predecessor-version":[{"id":11328,"href":"https:\/\/h3africa.org\/index.php\/wp-json\/wp\/v2\/pages\/8742\/revisions\/11328"}],"wp:attachment":[{"href":"https:\/\/h3africa.org\/index.php\/wp-json\/wp\/v2\/media?parent=8742"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/h3africa.org\/index.php\/wp-json\/wp\/v2\/categories?post=8742"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/h3africa.org\/index.php\/wp-json\/wp\/v2\/tags?post=8742"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}