H3Africa Publications for 2022


  1. Polygenic risk scores for CARDINAL study. Adebamowo CA, Adeyemo A, Ashaye A, Akpa OM, Chikowore T, Choudhury A, Fakim YJ, Fatumo S, Hanchard N, Hauser M, Mitchell B, Mulder N, Ofori-Acquah SF, Owolabi M, Ramsay M, Tayo B, VasanthKumar AB, Zhang Y, Adebamowo SN. Nat Genet. 2022 May 5. doi: 10.1038/s41588-022-01074-3. Epub ahead of print. PMID: 35513726.
  2. Feasibility of virtual reality based training for optimising COVID-19 case handling in Uganda. Buyego P, Katwesigye E, Kebirungi G, Nsubuga M, Nakyejwe S, Cruz P, McCarthy MC, Hurt D, Kambugu A, Arinaitwe JW, Ssekabira U, Jjingo D. BMC Med Educ. 2022 Apr 13;22(1):274. doi: 10.1186/s12909-022-03294-x. PMID: 35418070; PMCID: PMC9006530.
  3. The Gene Curation Coalition: A global effort to harmonize gene-disease evidence resources. DiStefano MT, Goehringer S, Babb L, Alkuraya FS, Amberger J, Amin M, Austin-Tse C, Balzotti M, Berg JS, Birney E, Bocchini C, Bruford EA, Coffey AJ, Collins H, Cunningham F, Daugherty LC, Einhorn Y, Firth HV, Fitzpatrick DR, Foulger RE, Goldstein J, Hamosh A, Hurles MR, Leigh SE, Leong IUS, Maddirevula S, Martin CL, McDonagh EM, Olry A, Puzriakova A, Radtke K, Ramos EM, Rath A, Riggs ER, Roberts AM, Rodwell C, Snow C, Stark Z, Tahiliani J, Tweedie S, Ware JS, Weller P, Williams E, Wright CF, Yates TM, Rehm HL. Genet Med. 2022 May 4:S1098-3600(22)00746-8. doi: 10.1016/j.gim.2022.04.017. Epub ahead of print. PMID: 35507016.
  4. Polygenic risk scores for CARDINAL study. Adebamowo CA, Adeyemo A, Ashaye A, Akpa OM, Chikowore T, Choudhury A, Fakim YJ, Fatumo S, Hanchard N, Hauser M, Mitchell B, Mulder N, Ofori-Acquah SF, Owolabi M, Ramsay M, Tayo B, VasanthKumar AB, Zhang Y, Adebamowo SN. Nat Genet. 2022 May 5. doi: 10.1038/s41588-022-01074-3. Epub ahead of print. PMID: 35513726.
  5. A View on Genomic Medicine Activities in Africa: Implications for Policy. Jongeneel CV, Kotze MJ, Bhaw-Luximon A, Fadlelmola FM, Fakim YJ, Hamdi Y, Kassim SK, Kumuthini J, Nembaware V, Radouani F, Tiffin N, Mulder N. Front. Genet., 27 April 2022 | https://doi.org/10.3389/fgene.2022.769919
  6. Dementia in Africa: Current evidence, knowledge gaps, and future directions. Akinyemi RO, Yaria J, Ojagbemi A, Guerchet M, Okubadejo N, Njamnshi AK, Sarfo FS, Akpalu A, Ogbole G, Ayantayo T, Adokonou T, Paddick SM, Ndetei D, Bosche J, Ayele B, Damas A, Coker M, Mbakile-Mahlanza L, Ranchod K, Bobrow K, Anazodo U, Damasceno A, Seshadri S, Pericak-Vance M, Lawlor B, Miller BL, Owolabi M, Baiyewu O, Walker R, Gureje O, Kalaria RN, Ogunniyi A; African Dementia Consortium (AfDC). Alzheimers Dement. 2022 Apr;18(4):790-809. doi: 10.1002/alz.12432. Epub 2021 Sep 27. PMID: 34569714; PMCID: PMC8957626.
  7. Prevalence of vaginal HPV infection among adolescent and early adult girls in Jos, North-Central Nigeria. Cosmas NT, Nimzing L, Egah D, Famooto A, Adebamowo SN, Adebamowo CA. BMC Infect Dis. 2022 Apr 5;22(1):340. doi: 10.1186/s12879-022-07215-7. PMID: 35382756.
  8. Current profile of Charcot-Marie-Tooth disease in Africa: A systematic review. Yalcouyé A, Esoh K, Guida L, Wonkam A. J Peripher Nerv Syst. 2022 Apr 5. doi: 10.1111/jns.12489. Epub ahead of print. PMID: 35383421.
  9. Age Estimate of GJB2-p.(Arg143Trp) Founder Variant in Hearing Impairment in Ghana, Suggests Multiple Independent Origins across Populations. Aboagye ET, Adadey SM, Esoh K, Jonas M, de Kock C, Amenga-Etego L, Awandare GA, Wonkam A. Biology (Basel). 2022 Mar 21;11(3):476. doi: 10.3390/biology11030476. PMID: 35336849; PMCID: PMC8945073.
  10. Green leafy vegetable intakes are inversely related to the incidence of stroke. Olowoyo P, Okekunle AP, Ojagbemi A, Akpa OM, Akinyemi R, Lackland D, Ovbiagele B, Owolabi M. Eur J Prev Cardiol. 2022 Feb 9;28(18):e21-e23. doi: 10.1093/eurjpc/zwaa040. PMID: 33624025.
  11. The Sickle Cell Disease Ontology: recent development and expansion of the universal sickle cell knowledge representation. Mazandu GK, Hotchkiss J, Nembaware V, Wonkam A, Mulder N. Database (Oxford). 2022 Apr 1;2022:baac014. doi: 10.1093/database/baac014. PMID: 35363306.
  12. Lipid traits and type 2 diabetes risk in African ancestry individuals: A Mendelian Randomization study. Soremekun O, Karhunen V, He Y, Rajasundaram S, Liu B, Gkatzionis A, Soremekun C, Udosen B, Musa H, Silva S, Kintu C, Mayanja R, Nakabuye M, Machipisa T, Mason A, Vujkovic M, Zuber V, Soliman M, Mugisha J, Nash O, Kaleebu P, Nyirenda M, Chikowore T, Nitsch D, Burgess S, Gill D, Fatumo S. EBioMedicine. 2022 Mar 21;78:103953. doi: 10.1016/j.ebiom.2022.103953. Epub ahead of print. PMID: 35325778; PMCID: PMC8941323.
  13. Clinical and Genetic Aspects of Huntington’s Disease in the Malian Population. Bocoum A, Coulibaly T, Ouologuem M, Cissé L, Diallo SH, Maiga BB, Dembélé K, Diallo S, Coulibaly SDP, Kané F, Coulibaly T, Coulibaly D, Taméga A, Yalcouyé A, Diarra S, Dembélé ME, Maiga AB, Cissé CAK, Traoré O, Fischbeck KH, Guinto CO, Maiga Y, Landouré G; from The H3Africa consortium. J Huntingtons Dis. 2022 Mar 15. doi: 10.3233/JHD-220529. Epub ahead of print. PMID: 35311712.
  14. Symbolic Legislation and the Regulation of Stroke Biobanking and Genomics Research in Sub-Saharan Africa. Adigun M, Ojebuyi B, Akinyemi J, Wahab K, Akpalu A, Sarfo FS, Owolabi LF, Musbahu R, Bello A, Obiako R, Ogunronbi M, Nichols M, Jenkins C, Jegede A, Kalaria R, Owolabi M, Ovbiagele B, Arulogun O, Akinyemi R. Theory Pract Legis. 2021;9(3):404-424. doi: 10.1080/20508840.2022.2025741. Epub 2022 Jan 31. PMID: 35198212; PMCID: PMC8863338.
  15. Short- and long-read metagenomics of urban and rural South African gut microbiomes reveal a transitional composition and undescribed taxa. Tamburini FB, Maghini D, Oduaran OH, Brewster R, Hulley MR, Sahibdeen V, Norris SA, Tollman S, Kahn K, Wagner RG, Wade AN, Wafawanaka F, Gómez-Olivé FX, Twine R, Lombard Z; H3Africa AWI-Gen Collaborative Centre, Hazelhurst S, Bhatt AS. Nat Commun. 2022 Feb 22;13(1):926. doi: 10.1038/s41467-021-27917-x. PMID: 35194028.
  16. HIV-1 drug resistance and genetic diversity in a cohort of people with HIV-1 in Nigeria. Oluniyi PE, Ajogbasile FV, Zhou S, Fred-Akintunwa I, Polyak CS, Ake JA, Tovanabutra S, Iroezindu M, Rolland M, Happi CT. AIDS. 2022 Jan 1;36(1):137-146. doi: 10.1097/QAD.0000000000003098. PMID: 34628443; PMCID: PMC8654252.
  17. African Genomic Medicine Portal: A Web Portal for Biomedical Applications. Othman H, Zass L, da Rocha JEB, Radouani F, Samtal C, Benamri I, Kumuthini J, Fakim YJ, Hamdi Y, Mezzi N, Boujemaa M, Okeke CJ, Tendwa MB, Sanak K, Chaouch M, Panji S, Kefi R, Sallam RM, Ghoorah AW, Romdhane L, Kiran A, Meintjes AP, Maturure P, Jmel H, Ksouri A, Azzouzi M, Farahat MA, Ahmed S, Sibira R, Turkson MEE, Ssekagiri A, Parker Z, Fadlelmola FM, Ghedira K, Mulder N, Kamal Kassim S. J Pers Med. 2022 Feb 11;12(2):265. doi: 10.3390/jpm12020265. PMID: 35207753; PMCID: PMC8879570.
  18. Genetic associations with carotid intima-media thickness link to atherosclerosis with sex-specific effects in sub-Saharan Africans. Boua PR, Brandenburg JT, Choudhury A, Sorgho H, Nonterah EA, Agongo G, Asiki G, Micklesfield L, Choma S, Gómez-Olivé FX, Hazelhurst S, Tinto H, Crowther NJ, Mathew CG, Ramsay M; AWI-Gen Study; H3Africa Consortium. Nat Commun. 2022 Feb 14;13(1):855. doi: 10.1038/s41467-022-28276-x. PMID: 35165267.
  19. African Rigorous Innovative Stroke Epidemiological Surveillance: Protocol for a Community-Based Mobile-Health Study. Popoola O, Ovbiagele B, Arulogun O, Akinyemi J, Akinyemi R, Uvere E, Akpa O, Salami A, Taiwo O, Olaniyan O, Walker R, Jenkins C, Owolabi M. Neuroepidemiology. 2022;56(1):17-24. doi: 10.1159/000518885. Epub 2021 Nov 25. PMID: 34903691.
  20. Primary stroke prevention worldwide: translating evidence into action. Owolabi MO, Thrift AG, Mahal A, Ishida M, Martins S, Johnson WD, Pandian J, Abd-Allah F, Yaria J, Phan HT, Roth G, Gall SL, Beare R, Phan TG, Mikulik R, Akinyemi RO, Norrving B, Brainin M, Feigin VL; Stroke Experts Collaboration Group. Lancet Public Health. 2022 Jan;7(1):e74-e85. doi: 10.1016/S2468-2667(21)00230-9. Epub 2021 Oct 29. Erratum in: Lancet Public Health. 2022 Jan;7(1):e14. PMID: 34756176; PMCID: PMC8727355.
  21. Crafting Community-Based Participatory Research Stroke Interventions. Nichols M, Magwood G, Woodbury M, Brown K, Jenkins C, Owolabi M. Stroke. 2022 Feb 2:STROKEAHA121035306. doi: 10.1161/STROKEAHA.121.035306. Epub ahead of print. PMID: 35105185.
  22. A roadmap to increase diversity in genomic studies. Fatumo S, Chikowore T, Choudhury A, Ayub M, Martin AR, Kuchenbaecker K. Nat Med. 2022 Feb 10. doi: 10.1038/s41591-021-01672-4. Epub ahead of print. PMID: 35145307.
  23. Guideline for feedback of individual genetic research findings for genomics research in Africa. Matimba A, Ali S, Littler K, Madden E, Marshall P, McCurdy S, Nembaware V, Rodriguez L, Seeley J, Tindana P, Yakubu A, de Vries J; H3Africa Ethics and Community Engagement Working Group. BMJ Glob Health. 2022 Jan;7(1):e007184. doi: 10.1136/bmjgh-2021-007184. PMID: 35017180.
  24. HIV-1 drug resistance and genetic diversity in a cohort of people with HIV-1 in Nigeria. Oluniyi PE, Ajogbasile FV, Zhou S, Fred-Akintunwa I, Polyak CS, Ake JA, Tovanabutra S, Iroezindu M, Rolland M, Happi CT. AIDS. 2022 Jan 1;36(1):137-146. doi: 10.1097/QAD.0000000000003098. PMID: 34628443; PMCID: PMC8654252.
  25. Translational Science, DNA Commercialization, and Informed Consent: The Need for Specific Terminology, Insights from a Review of H3Africa Projects. Marshall P, Royal CDM, Chadwick R. Public Health Genomics. 2022 Jan 25:1-8. doi: 10.1159/000521371. Epub ahead of print. PMID: 35078200.
  26. Leukocyte methylomic imprints of exposure to the genocide against the Tutsi in Rwanda: a pilot epigenome-wide analysis. Musanabaganwa C, Wani AH, Donglasan J, Fatumo S, Jansen S, Mutabaruka J, Rutembesa E, Uwineza A, Hermans EJ, Roozendaal B, Wildman DE, Mutesa L, Uddin M. Epigenomics. 2022 Jan;14(1):11-25. doi: 10.2217/epi-2021-0310. Epub 2021 Dec 8. PMID: 34875875; PMCID: PMC8672329.
  27. Towards equitable genomics governance in Africa: Guiding principles from theories of global health governance and the African moral theory of Ubuntu. Munung NS, de Vries J, Pratt B. Bioethics. 2022 Jan 18. doi: 10.1111/bioe.12995. Epub ahead of print. PMID: 35041227.
  28. Risk Factor Characterization of Ischemic Stroke Subtypes Among West Africans. Sarfo FS, Ovbiagele B, Akpa O, Akpalu A, Wahab K, Obiako R, Komolafe M, Owolabi L, Ogbole G, Calys-Tagoe B, Fakunle A, Sanni T, Mulugeta G, Abdul S, Akintunde AA, Olowookere S, Uvere EO, Ibinaiye P, Akinyemi J, Uwanuruochi K, Olayemi B, Odunlami OA, Abunimye E, Arulogun O, Isah SY, Abubakar SA, Oladimeji A, Adebayo P, Shidali V, Chukwuonye II, Akpalu J, Tito-Ilori MM, Asowata OJ, Sanya EO, Amusa G, Onyeonoro U, Ogunmodede JA, Sule AG, Akisanya C, Mensah Y, Oyinloye OI, Appiah L, Agunloye AM, Osaigbovo GO, Olabinri E, Kolo PM, Okeke O, Adeoye AM, Ajose O, Jenkins C, Lackland DT, Egberongbe AA, Adeniji O, Ohifemen Adeleye O, Tiwari HK, Arnett D, Laryea RY, Olunuga T, Akinwande KS, Imoh L, Ogah OS, Melikam ES, Adebolaji A, Oguike W, Ogunronbi O, Adeniyi W, Olugbo OY, Bello AH, Ohagwu KA, Ogunjimi L, Agyekum F, Iheonye H, Adesina J, Diala S, Dambatta HA, Ikubor J, Singh A, Adamu S, Obese V, Adusei N, Owusu D, Ampofo M, Tagge R, Efidi R, Fawale B, Yaria J, Akinyemi R, Owolabi M; SIREN. Stroke. 2022 Jan;53(1):134-144. doi: 10.1161/STROKEAHA.120.032072. Epub 2021 Sep 30. PMID: 34587795; PMCID: PMC8712357.
  29. Pre-Stroke Depression in Ghana and Nigeria: Prevalence, Predictors and Association With Poststroke Depression. Ojagbemi A, Akinyemi J, Wahab K, Owolabi L, Arulogun O, Akpalu J, Akpalu A, Ogbole G, Akinsanya C, Wasiu A, Tito-Ilori M, Adekunle F, Lyrea R, Akpa O, Akinyemi R, Sarfo F, Owolabi M, Ovbiagele B. J Geriatr Psychiatry Neurol. 2022 Jan;35(1):121-127. doi: 10.1177/0891988720968274. Epub 2020 Oct 19. PMID: 33073691; PMCID: PMC8241399.
  30. Using population-specific add-on polymorphisms to improve genotype imputation in underrepresented populations. Xu ZM, Rüeger S, Zwyer M, Brites D, Hiza H, Reinhard M, Rutaihwa L, Borrell S, Isihaka F, Temba H, Maroa T, Naftari R, Hella J, Sasamalo M, Reither K, Portevin D, Gagneux S, Fellay J. PLoS Comput Biol. 2022 Jan 13;18(1):e1009628. doi: 10.1371/journal.pcbi.1009628. PMID: 35025869; PMCID: PMC8791479.