Antecedent febrile illness and occurrence of stroke in West Africa: The SIREN study. Sarfo FS, Ovbiagele B, Matthew OA, Akpalu A, Wahab K, Obiako R, Owolabi L, Asowata O, Ogbole G, Komolafe M, Akinyemi R, Owolabi M; SIREN. J Neurol Sci. 2020 Nov 15;418:117158. doi: 10.1016/j.jns.2020.117158. Epub 2020 Sep 28. PMID: 33002758; PMCID: PMC8006213.
Neuropsychiatric and socio-cultural aspects in a Malian family with spinocerebellar ataxia. Coulibaly SP, Coulibaly S, Sango HA, Cissé L, Maïga FI, Maïga B, Diarra S, Diallo SH, Coulibaly T, Traoré M, Guinto CO, Koumaré B, Landouré G. Ann Med Psychol (Paris). 2020 Mar;178(3):278-282. doi: 10.1016/j.amp.2018.02.018. Epub 2019 Mar 18. PMID: 32431322; PMCID: PMC7236554.
Early transmission of SARS-CoV-2 in South Africa: An epidemiological and phylogenetic report. Giandhari J, Pillay S, Wilkinson E, Tegally H, Sinayskiy I, Schuld M, Lourenco J, Chimukangara B, Lessells R, Moosa Y, Gazy I, Fish M, Singh L, Khanyile KS, Fonseca V, Giovanetti M, Alcantara LC, Petruccione F, de Oliveira T. medRxiv [Preprint]. 2020 May 30:2020.05.29.20116376. doi: 10.1101/2020.05.29.20116376. Update in: Int J Infect Dis. 2020 Nov 12;: PMID: 32511505; PMCID: PMC7273273.
Genetic modifiers of long-term survival in sickle cell anemia. Wonkam A, Chimusa ER, Mnika K, Pule GD, Ngo Bitoungui VJ, Mulder N, Shriner D, Rotimi CN, Adeyemo A. Clin Transl Med. 2020 Aug;10(4):e152. doi: 10.1002/ctm2.152. PMID: 32898326; PMCID: PMC7423184.
Cross-reactive coronavirus antibodies with diverse epitope specificities and extra-neutralization functions. Shiakolas AR, Kramer KJ, Wrapp D, Richardson SI, Schäfer A, Wall S, Wang N, Janowska K, Pilewski KA, Venkat R, Parks R, Manamela NP, Raju N, Fechter EF, Holt CM, Suryadevara N, Chen RE, Martinez DR, Nargi RS, Sutton RE, Ledgerwood JE, Graham BS, Diamond MS, Haynes BF, Acharya P, Carnahan RH, Crowe JE, Baric RS, Morris L, McLellan JS, Georgiev IS. bioRxiv [Preprint]. 2020 Dec 20:2020.12.20.414748. doi: 10.1101/2020.12.20.414748. Update in: Cell Rep Med. 2021 May 21;:100313. PMID: 33398266; PMCID: PMC7781301.
Hearing Impairment Overview in Africa: the Case of Cameroon. Wonkam Tingang E, Noubiap JJ, F Fokouo JV, Oluwole OG, Nguefack S, Chimusa ER, Wonkam A. Genes (Basel). 2020 Feb 22;11(2):233. doi: 10.3390/genes11020233. PMID: 32098311; PMCID: PMC7073999.
The road ahead in genetics and genomics. McGuire AL, Gabriel S, Tishkoff SA, Wonkam A, Chakravarti A, Furlong EEM, Treutlein B, Meissner A, Chang HY, López-Bigas N, Segal E, Kim JS. Nat Rev Genet. 2020 Oct;21(10):581-596. doi: 10.1038/s41576-020-0272-6. Epub 2020 Aug 24. PMID: 32839576; PMCID: PMC7444682.
The road ahead in genetics and genomics. McGuire AL, Gabriel S, Tishkoff SA, Wonkam A, Chakravarti A, Furlong EEM, Treutlein B, Meissner A, Chang HY, López-Bigas N, Segal E, Kim JS. The road ahead in genetics and genomics. Nat Rev Genet. 2020 Oct;21(10):581-596. doi: 10.1038/s41576-020-0272-6. Epub 2020 Aug 24. PMID: 32839576; PMCID: PMC7444682.
Challenges of Genetic Data Sharing in African Studies. Stein CM. Challenges of Genetic Data Sharing in African Studies. Trends Genet. 2020 Dec;36(12):895-896. doi: 10.1016/j.tig.2020.07.010. Epub 2020 Aug 14. PMID: 32807514.
High-depth African genomes inform human migration and health. Choudhury, A., Aron, S., Botigué, L.R. et al. High-depth African genomes inform human migration and health. Nature586, 741–748 (2020). https://doi.org/10.1038/s41586-020-2859-7 28 October 2020
MECP2 duplication syndrome in a patient from Cameroon. Cedrik Tekendo-Ngongang, Sophie Dahoun, Séraphin Nguefack, Isabelle Moix, Stefania Gimelli, Huguette Zambo, Michael A Morris, Frédérique Sloan-Béna, Ambroise Wonkam. 2020 Apr;182(4):619-622. doi: 10.1002/ajmg.a.61510. Epub 2020 Feb 13. PMID: 32052928 PMCID: PMC7450984 DOI: 10.1002/ajmg.a.61510 Free PMC article
Brain microRNAs associated with late-life depressive symptoms are also associated with cognitive trajectory and dementia. Thomas S Wingo, Jingjing Yang, Wen Fan, Se Min Canon, Ekaterina Sergeevna Gerasimov, Adriana Lori, Benjamin Logsdon, Bing Yao, Nicholas T Seyfried, James J Lah, Allan I Levey, Patricia A Boyle, Julia A Schneider, Philip L De Jager, David A Bennett, Aliza P Wingo. 2020 Feb 6;5:6. doi: 10.1038/s41525-019-0113-8. eCollection 2020. PMID: 32047652 PMCID: PMC7004995 DOI: 10.1038/s41525-019-0113-8 Free PMC article
Integrated Computational Approaches and Tools forAllosteric Drug Discovery. Olivier Sheik Amamuddy, Wayde Veldman, Colleen Manyumwa, Afrah Khairallah, Steve Agajanian, Odeyemi Oluyemi, Gennady Verkhivker, Ozlem Tastan Bishop. 2020 Jan 28;21(3):847. doi: 10.3390/ijms21030847. PMID: 32013012 PMCID: PMC7036869 DOI: 10.3390/ijms21030847 Free PMC article
Cascade Testing for Fragile X Syndrome in a Rural Setting in Cameroon (Sub-Saharan Africa). Karen Kengne Kamga, Séraphin Nguefack, Khuthala Minka, Edmond Wonkam Tingang, Alina Esterhuizen, Syntia Nchangwi Munung, Jantina De Vries, Ambroise Wonkam. 2020 Jan 28;11(2):136. doi: 10.3390/genes11020136. PMID: 32012997 PMCID: PMC7074341 DOI: 10.3390/genes11020136 Free PMC article
A novel variant in the spatacsin gene causing SPG11 in a Malian family. Guida Landouré, Kékouta Dembélé, Salimata Diarra, Lassana Cissé, Oumar Samassékou, Abdoulaye Bocoum, Abdoulaye Yalcouyé, Moussa Traoré, Kenneth H Fischbeck, Cheick O Guinto, H3Africa Consortium. 2020 Apr 15;411:116675. doi: 10.1016/j.jns.2020.116675. Epub 2020 Jan 7. PMID: 32007754 DOI: 10.1016/j.jns.2020.116675
Genetics of schizophrenia in the South African Xhosa. S Gulsuner, D J Stein, E S Susser, G Sibeko, A Pretorius, T Walsh, L Majara, M M Mndini, S G Mqulwana, O A Ntola, S Casadei, L L Ngqengelele, V Korchina, C van der Merwe, M Malan, K M Fader, M Feng, E Willoughby, D Muzny, A Baldinger, H F Andrews, R C Gur, R A Gibbs, Z Zingela, M Nagdee, R S Ramesar, M-C King, J M McClellan. 2020 Jan 31;367(6477):569-573. doi: 10.1126/science.aay8833. PMID: 32001654 DOI: 10.1126/science.aay8833
Hemopexin deficiency promotes acute kidney injury in sickle cell disease. Solomon F Ofori-Acquah, Rimi Hazra, Oluwaseun O Orikogbo, Danielle Crosby, Bethany Flage, Ezekiel B Ackah, Diane Lenhart, Roderick J Tan, Dario A Vitturi, Vivian Paintsil, Ellis Owusu-Dabo, Samit Ghosh, SickleGenAfrica Network. 2020 Mar 26;135(13):1044-1048. doi: 10.1182/blood.2019002653. PMID: 32043112 PMCID: PMC7218735 (available on 2021-03-26) DOI: 10.1182/blood.2019002653
Quadrivalent VesiculoVax vaccine protects nonhuman primates from viral-induced hemorrhagic fever and death. Robert W Cross, Rong Xu, Demetrius Matassov, Stefan Hamm, Theresa E Latham, Cheryl S Gerardi, Rebecca M Nowak, Joan B Geisbert, Ayuko Ota-Setlik, Krystle N Agans, Amara Luckay, Susan E Witko, Lena Soukieh, Daniel J Deer, Chad E Mire, Heinz Feldmann, Christian Happi, Karla A Fenton, John H Eldridge, Thomas W Geisbert. 2020 Jan 2;130(1):539-551. doi: 10.1172/JCI131958. PMID: 31820871 PMCID: PMC6934204 DOI: 10.1172/JCI131958 Free PMC article
Hinge length contributes to the phagocytic activity of HIV-specific IgG1 and IgG3 antibodies. Thach H Chu, Andrew R Crowley, Iara Backes, Cheryl Chang, Matthew Tay, Thomas Broge, Marina Tuyishime, Guido Ferrari, Michael S Seaman, Simone I Richardson, Georgia D Tomaras, Galit Alter, David Leib, Margaret E Ackerman. 2020 Feb 24;16(2):e1008083. doi: 10.1371/journal.ppat.1008083. eCollection 2020 Feb. PMID: 32092122 PMCID: PMC7058349 DOI: 10.1371/journal.ppat.1008083 Free PMC article
Regional Patterns and Association Between Obesity and Hypertension in Africa: Evidence From the H3Africa CHAIR Study. Onoja M Akpa, Felix Made, Akinlolu Ojo, Bruce Ovbiagele, Dwomoa Adu, Ayesha A Motala, Bongani M Mayosi, Sally N Adebamowo, Mark E Engel, Bamidele Tayo, Charles Rotimi, Babatunde Salako, Rufus Akinyemi, Mulugeta Gebregziabher, Fred Sarfo, Kolawole Wahab, Godfred Agongo, Marianne Alberts, Stuart A Ali, Gershim Asiki, Romuald P Boua, F Xavier Gómez-Olivé, Felistas Mashinya, Lisa Micklesfield, Shukri F Mohamed, Engelbert A Nonterah, Shane A Norris, Hermann Sorgho, Stephen Tollman, Rulan S Parekh, Chishala Chishala, Kenneth Ekoru, Salina P Waddy, Emmanuel Peprah, George A Mensah, Ken Wiley, Jennifer Troyer, Michèle Ramsay, Mayowa O Owolabi, as members of the CVD Working Group of the H3Africa Consortium. 2020 May;75(5):1167-1178. doi: 10.1161/HYPERTENSIONAHA.119.14147. Epub 2020 Mar 16. PMID: 32172619 PMCID: PMC7176339 DOI: 10.1161/HYPERTENSIONAHA.119.14147 Free PMC article
H3Africa partnerships to empower clinical research sites to generate high-quality biological samples. Talishiea Croxton, Ndidi Agala, Emmanuel Jonathan, Olasinbo Balogun, Petronilla J Ozumba, Enzenwa Onyemata, Shefiya Lawal, Manmak Mamven, Samuel Ajayi, Sylvia E Melikam, Mayowa Owolabi, Bruce Ovbiagele, Dwomoa Adu, Akinlolu Ojo, Christine M Beiswanger, Alash’le Abimiku. 2020 Mar 18;9(1):935. doi: 10.4102/ajlm.v9i1.935. eCollection 2020. PMID: 32284923 PMCID: PMC7136697 DOI: 10.4102/ajlm.v9i1.935 Free PMC article
Neuropsychiatric and socio-cultural aspects in a Malian family with spinocerebellar ataxia. Souleymane P Coulibaly, Souleymane Coulibaly, Hammadoun A Sango, Lassana Cissé, Fatoumata I Maïga, Boubacar Maïga, Salimata Diarra, Seybou H Diallo, Thomas Coulibaly, Mahamadou Traoré, Cheick O Guinto, Baba Koumaré, Guida Landouré. 2020 Mar;178(3):278-282. doi: 10.1016/j.amp.2018.02.018. Epub 2019 Mar 18. PMID: 32431322 PMCID: PMC7236554 (available on 2021-03-01) DOI: 10.1016/j.amp.2018.02.018
Real-time Metagenomic Analysis of Undiagnosed Fever Cases Unveils a Yellow Fever Outbreak in Edo State, Nigeria. Fehintola V Ajogbasile, Judith U Oguzie, Paul E Oluniyi, Philomena E Eromon, Jessica N Uwanibe, Samar B Mehta, Katherine J Siddle, Ikponmwosa Odia, Sarah M Winnicki, Nosa Akpede, George Akpede, Sylvanus Okogbenin, Ephraim Ogbaini-Emovon, Bronwyn L MacInnis, Onikepe A Folarin, Kayvon Modjarrad, Stephen F Schaffner, Oyewale Tomori, Chikwe Ihekweazu, Pardis C Sabeti, Christian T Happi. 2020 Feb 21;10(1):3180. doi: 10.1038/s41598-020-59880-w. PMID: 32081931 PMCID: PMC7035389 DOI: 10.1038/s41598-020-59880-w Free PMC article
Clustering of asymptomatic Plasmodium falciparum infection and the effectiveness of targeted malaria control measures. Jeffrey G Shaffer, Mahamoudou B Touré, Nafomon Sogoba, Seydou O Doumbia, Jules F Gomis, Mouhamadou Ndiaye, Daouda Ndiaye, Ayouba Diarra, Ismaela Abubakar, Abdullahi Ahmad, Muna Affara, Davis Nwakanma, Mary Lukowski, James C Welty, Frances J Mather, Joseph Keating, Donald J Krogstad. 2020 Jan 21;19(1):33. doi: 10.1186/s12936-019-3063-9. PMID: 31964378 PMCID: PMC6975028 DOI: 10.1186/s12936-019-3063-9 Free PMC article
Shared proteomic effects of cerebral atherosclerosis and Alzheimer’s disease on the human brain. Aliza P Wingo, Wen Fan, Duc M Duong, Ekaterina S Gerasimov, Eric B Dammer, Yue Liu, Nadia V Harerimana, Bartholomew White, Madhav Thambisetty, Juan C Troncoso, Namhee Kim, Julie A Schneider, Ihab M Hajjar, James J Lah, David A Bennett, Nicholas T Seyfried, Allan I Levey, Thomas S Wingo. 2020 Jun;23(6):696-700. doi: 10.1038/s41593-020-0635-5. Epub 2020 May 18. PMID: 32424284 PMCID: PMC7269838 (available on 2020-11-18) DOI: 10.1038/s41593-020-0635-5
Ten simple rules for providing effective bioinformatics research support. Judit Kumuthini, Michael Chimenti, Sven Nahnsen, Alexander Peltzer, Rebone Meraba, Ross McFadyen, Gordon Wells, Deanne Taylor, Mark Maienschein-Cline, Jian-Liang Li, Jyothi Thimmapuram, Radha Murthy-Karuturi, Lyndon Zass. 2020 Mar 26;16(3):e1007531. doi: 10.1371/journal.pcbi.1007531. PMID: 32214318 PMCID: PMC7098546 DOI: 10.1371/journal.pcbi.1007531 Free PMC article
OGRDB: a reference database of inferred immune receptor genes. William Lees, Christian E Busse, Martin Corcoran, Mats Ohlin, Cathrine Scheepers, Frederick A Matsen, Gur Yaari, Corey T Watson, AIRR Community; Andrew Collins, Adrian J Shepherd. 2020 Jan 8;48(D1):D964-D970. doi: 10.1093/nar/gkz822. PMID: 31566225 PMCID: PMC6943078 DOI: 10.1093/nar/gkz822 Free PMC article
A broad survey of DNA sequence data simulation tools. Shatha Alosaimi, Armand Bandiang, Noelle van Biljon, Denis Awany, Prisca K Thami, Milaine S S Tchamga, Anmol Kiran, Olfa Messaoud, Radia Ismaeel Mohammed Hassan, Jacquiline Mugo, Azza Ahmed, Christian D Bope, Imane Allali, Gaston K Mazandu, Nicola J Mulder, Emile R Chimusa. 2020 Jan 22;19(1):49-59. doi: 10.1093/bfgp/elz033. PMID: 31867604 PMCID: PMC7030445 (available on 2020-12-23) DOI: 10.1093/bfgp/elz033
Copy number variation in human genomes from three major ethno-linguistic groups in Africa. Oscar A Nyangiri, Harry Noyes, Julius Mulindwa, Hamidou Ilboudo, Justin Windingoudi Kabore, Bernardin Ahouty, Mathurin Koffi, Olivier Fataki Asina, Dieudonne Mumba, Elvis Ofon, Gustave Simo, Magambo Phillip Kimuda, John Enyaru, Vincent Pius Alibu, Kelita Kamoto, John Chisi, Martin Simuunza, Mamadou Camara, Issa Sidibe, Annette MacLeod, Bruno Bucheton, Neil Hall, Christiane Hertz-Fowler, Enock Matovu, TrypanoGEN Research Group, as members of The H3Africa Consortium. 2020 Apr 10;21(1):289. doi: 10.1186/s12864-020-6669-y. PMID: 32272904 PMCID: PMC7147055 DOI: 10.1186/s12864-020-6669-y Free PMC article
High Levels of Genetic Diversity within Nilo-Saharan Populations: Implications for Human Adaptation. Julius Mulindwa, Harry Noyes, Hamidou Ilboudo, Luca Pagani, Oscar Nyangiri, Magambo Phillip Kimuda, Bernardin Ahouty, Olivier Fataki Asina, Elvis Ofon, Kelita Kamoto, Justin Windingoudi Kabore, Mathurin Koffi, Dieudonne Mumba Ngoyi, Gustave Simo, John Chisi, Issa Sidibe, John Enyaru, Martin Simuunza, Pius Alibu, Vincent Jamonneau, Mamadou Camara, Andy Tait, Neil Hall, Bruno Bucheton, Annette MacLeod, Christiane Hertz-Fowler, Enock Matovu, TrypanoGEN Research Group of the H3Africa Consortium. 2020 Sep 3;107(3):473-486. doi: 10.1016/j.ajhg.2020.07.007. Epub 2020 Aug 10. PMID: 32781046 PMCID: PMC7477016 (available on 2021-03-03) DOI: 10.1016/j.ajhg.2020.07.007
Nrf2 deficiency in mice attenuates erythropoietic stress-related macrophage hypercellularity. Oluwabukola T Gbotosho, Maria G Kapetanaki, Mark Ross, Samit Ghosh, Frances Weidert, Grant C Bullock, Simon Watkins, Solomon F Ofori-Acquah, Gregory J Kato. 2020 Apr;84:19-28.e4. doi: 10.1016/j.exphem.2020.02.005. Epub 2020 Mar 6. PMID: 32151553 PMCID: PMC7237317 (available on 2021-04-01) DOI: 10.1016/j.exphem.2020.02.005
The Influence of DNA Extraction and Lipid Removal on Human Milk Bacterial Profiles. Anna Ojo-Okunola, Shantelle Claassen-Weitz, Kilaza S Mwaikono, Sugnet Gardner-Lubbe, Heather J Zar, Mark P Nicol, Elloise du Toit. 2020 May 15;3(2):39. doi: 10.3390/mps3020039. PMID: 32429170 PMCID: PMC7359716 DOI: 10.3390/mps3020039 Free PMC article
Whole Genome Sequencing of SARS-CoV-2: Adapting Illumina Protocols for Quick and Accurate Outbreak Investigation during a Pandemic. Sureshnee Pillay, Jennifer Giandhari, Houriiyah Tegally, Eduan Wilkinson, Benjamin Chimukangara, Richard Lessells, Yunus Moosa, Stacey Mattison, Inbal Gazy, Maryam Fish, Lavanya Singh, Khulekani Sedwell Khanyile, James Emmanuel San, Vagner Fonseca, Marta Giovanetti, Luiz Carlos Alcantara Jr, Tulio de Oliveira. 2020 Aug 17;11(8):949. doi: 10.3390/genes11080949. PMID: 32824573 PMCID: PMC7464704 DOI: 10.3390/genes11080949 Free PMC article